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💡 All-in-one AI framework for semantic search, LLM orchestration and language model workflows

Python 12,652 832 Updated Jun 11, 2026

Examples for Optimization Methods in Metabolic Networks (ISBN: 978-1-119-02849-9)

GAMS 8 2 Updated Jul 1, 2017

Transforms complex documents like PDFs and Office docs into LLM-ready markdown/JSON for your Agentic workflows.

Python 67,383 5,676 Updated Jun 11, 2026

An agent-managed museum exhibit, built in Rust with Gajae-Code / LazyCodex — developed and maintained with no human intervention.

Rust 193,702 109,962 Updated Jun 8, 2026

AI agents running research on single-GPU nanochat training automatically

Python 86,437 12,522 Updated Mar 26, 2026

"CLI-Anything: Making ALL Software Agent-Native" -- CLI-Hub: https://clianything.cc/

Python 42,858 4,027 Updated Jun 12, 2026

AI Agent Framework, the Pydantic way

Python 17,731 2,212 Updated Jun 13, 2026

Player for your DRM-free audiobooks

Swift 2,124 256 Updated Jun 11, 2026

This repository includes the official implementation of OpenScholar: Synthesizing Scientific Literature with Retrieval-augmented LMs.

Python 1,532 168 Updated Aug 13, 2025

Connect Zotero and Dendron. No idea falls from the sky 🌦️, this tool is meant to allow for reproducible documentation of 💡 around the publishing process 📃.

Python 9 1 Updated Mar 9, 2024

Typer, build great CLIs. Easy to code. Based on Python type hints.

Python 19,563 910 Updated Jun 11, 2026

Single-cell perturbation analysis

Python 328 60 Updated Jun 11, 2026

Schema and generated objects for biolink data model and upper ontology

Python 243 88 Updated Jun 11, 2026
Python 26 6 Updated Jun 12, 2024

Python interface to TECAN Fluent liquid handling robot

Python 21 2 Updated Apr 18, 2024

Python soft for morphometric stain analysis.

Python 5 4 Updated Nov 26, 2020

Exercises for the book Artificial Intelligence: A Modern Approach

HTML 1,078 654 Updated Apr 8, 2026

🔬 Path to a free self-taught education in Bioinformatics!

6,908 1,093 Updated Apr 8, 2024

Learning Deep Representations of Data Distributions

TeX 987 99 Updated Jun 8, 2026

Toward High-Accuracy Open-Source Biomolecular Structure Prediction.

Python 1,943 280 Updated May 6, 2026

Fast, differentiable sorting and ranking in PyTorch

Python 865 41 Updated Mar 3, 2026
Python 65 12 Updated Jun 11, 2025

A collection of MCP servers.

88,974 11,514 Updated Jun 11, 2026

Differentiable, Hardware Accelerated, Molecular Dynamics

Jupyter Notebook 1,421 241 Updated Jun 12, 2026

High-Performance Symbolic Regression in Python and Julia

Python 3,582 332 Updated Jun 9, 2026

Helpful tools and examples for working with flex-attention

Python 1,195 77 Updated May 28, 2026

LLM101n: Let's build a Storyteller

37,302 2,050 Updated Aug 1, 2024

IJCAI‘23 Survey Track: Papers on Graph Pooling (GNN-Pooling)

116 14 Updated Mar 28, 2025

DeepDiff: Deep Difference and search of any Python object/data. DeepHash: Hash of any object based on its contents. Delta: Use deltas to reconstruct objects by adding deltas together.

Python 2,512 272 Updated May 15, 2026

Tensors and Dynamic neural networks in Python with strong GPU acceleration

Python 100,702 27,998 Updated Jun 13, 2026
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