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Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,694 1,077 Updated Apr 1, 2026

The AI developer platform. Use Weights & Biases to train and fine-tune models, and manage models from experimentation to production.

Python 10,957 852 Updated Apr 6, 2026

A deep-learning based multi-modal data integration suite that aims to achieve synesis in a flexible manner

Python 104 32 Updated Mar 31, 2026

Code for the paper "MetaQ: fast, scalable and accurate metacell inference via deep single-cell quantization"

Python 26 6 Updated Dec 7, 2024

Integrating scRNA-seq and scATAC-seq with inter-type attention heterogeneous graph neural networks

Python 4 1 Updated Mar 5, 2025

single-cell Contrastive INtegration

Python 3 Updated Aug 27, 2025

📚 从零开始构建大模型

Jupyter Notebook 28,436 2,629 Updated Mar 16, 2026

该仓库主要记录 NLP 算法工程师相关的顶会论文研读笔记

C++ 4,028 648 Updated Aug 18, 2023

《深入浅出图神经网络:GNN原理解析》配套代码

Jupyter Notebook 1,921 477 Updated Feb 24, 2021
Jupyter Notebook 1,709 169 Updated Sep 27, 2024

The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑‍🔬

Jupyter Notebook 13,067 1,864 Updated Dec 19, 2025