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Estimating Nucleophilicity and Electrophilicity with Automated Quantum Chemistry-Based Computations of Methyl Affinities

Jupyter Notebook 13 Updated Oct 21, 2024

PepFun 2.0: improved protocols for the analysis of natural and modified peptides

Python 25 4 Updated Jul 7, 2023

pyPept: a python library to generate atomistic 2D and 3D representations of peptides

Python 80 14 Updated Nov 5, 2025

Collection of tools to calculate properties of natural or synthetic peptides and proteins.

Python 42 7 Updated Nov 4, 2025

A repo for anything users/developers find interesting and want to share

Jupyter Notebook 9 2 Updated Oct 29, 2025

The official sources for the RDKit library

HTML 3,135 952 Updated Nov 5, 2025

Web-based molecule sketcher

TypeScript 669 213 Updated Nov 5, 2025

Generate CM5 atomic descriptors from SMILES

Python 5 1 Updated Jun 27, 2024

Semiempirical Extended Tight-Binding Program Package

Fortran 717 178 Updated Aug 1, 2025

RegioML predicts the regioselectivity of electrophilic aromatic substitution reactions using machine learning.

Python 1 Updated Jun 7, 2023

A QM-based workflow for determining the regioselectivity of palladium-catalyzed Heck reactions.

Jupyter Notebook 4 1 Updated Dec 16, 2022

Enable cheminformatics and quantum chemistry

Python 77 17 Updated Jan 11, 2024

CP2K Editor is a simple GUI for creating input files in the atomistic program CP2K. It is a easy and fast way to create the complex input file used in CP2K.

Python 57 17 Updated Jul 15, 2019