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CellChat Public
Forked from jinworks/CellChatR toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
R GNU General Public License v3.0 UpdatedOct 30, 2025 -
Scripts used for the analysis of PhIP-seq data taken from urban Dutch, rural Senegalese and Urban Senegalese populations
R MIT License UpdatedOct 6, 2025 -
TrAGEDy Public
Trajectory Alignment of Gene Expression Dynamics
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scglmmr Public
Forked from MattPM/scglmmrSample-level Single-cell Generalized Linear Multilevel Models in R
R Other UpdatedApr 22, 2024 -
Visium_Hpolygyrus_gut Public
Repository containing the code for the Visium spatial transcriptomic analysis of mouse gut under steady state and H. Polygyrus infection
Jupyter Notebook GNU General Public License v3.0 UpdatedFeb 13, 2024 -
paste2 Public
Forked from raphael-group/paste2Probabilistic Alignment of Spatial Transcriptomics Experiments v.2
Jupyter Notebook BSD 3-Clause "New" or "Revised" License UpdatedDec 26, 2023 -
friendly-collab-party Public
Forked from BrainonSilicon/friendly-collab-party1 UpdatedDec 16, 2021 -