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blatant-why Public
Forked from 001TMF/blatant-whyAI-powered biologics design campaign agent — multi-agent orchestration with BoltzGen, PXDesign, Protenix, and 200+ cloud tools. Antibodies, nanobodies, de novo binders, and beyond.
Python MIT License UpdatedMay 21, 2026 -
VenusFactory2 Public
Forked from ai4protein/VenusFactory2🏭 AI agent platform with skills for protein engineering, the noob-friendly AI tutorial tool for life science professionals.
Python Other UpdatedMay 15, 2026 -
OmicsClaw Public
Forked from TianGzlab/OmicsClawConversational & memory-enabled AI research partner for multi-omics analysis. From biological idea to full research paper.
Python Apache License 2.0 UpdatedMay 11, 2026 -
ScienceClaw Public
Forked from AgentTeam-TaichuAI/ScienceClawScienceClaw is a personal research assistant built with LangChain DeepAgents and AIO Sandbox infrastructure, adopting a completely new architecture beyond OpenClaw. It offers stronger security, bet…
Python UpdatedApr 23, 2026 -
AetherCell Public
Forked from Wenyuan-AI4science/AetherCellAetherCell is a hierarchical generative framework designed to predict context-specific transcriptomic responses to drugs and genetic perturbations. By bridging high-resolution RNA-seq contexts with…
Python Other UpdatedApr 13, 2026 -
cellink Public
Forked from theislab/cellinkScalable framework for integrating single-cell omics with genetic data using AnnData.
Python Apache License 2.0 UpdatedApr 8, 2026 -
scDFM Public
Forked from AI4Science-WestlakeU/scDFMscDFM: Distributional Flow Matching for Robust Single-Cell Perturbation Prediction (ICLR 2026)
Python MIT License UpdatedApr 7, 2026 -
clinical-research-assistant Public
Forked from bilalmirza96/clinical-research-assistantMIT License UpdatedApr 7, 2026 -
DruGUI Public
Forked from BioTender-max/DruGUIStructure-Based Virtual Screening Pipeline for AI Agents
Python UpdatedApr 1, 2026 -
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X-Cell Public
Forked from Xaira-Therapeutics/X-CellX-Cell: a diffusion language model for genome-scale perturbation prediction
Python Other UpdatedMar 16, 2026 -
minAlphaFold2 Public
Forked from ChrisHayduk/minAlphaFold2A minimal PyTorch re-implementation of AlphaFold2's model & training
Python MIT License UpdatedMar 13, 2026 -
alphagenome-pytorch Public
Forked from genomicsxai/alphagenome-pytorchAlphaGenome PyTorch port
Python Apache License 2.0 UpdatedMar 11, 2026 -
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KG-Orchestra Public
Forked from Fraunhofer-SCAI-Applied-Semantics/KG-OrchestraAn Open-Source Multi-Agent Framework for Evidence-Based Biomedical Knowledge Graphs Enrichment
Python UpdatedFeb 23, 2026 -
TheVirtualBiotech Public
Forked from harrisongzhang/TheVirtualBiotechPython MIT License UpdatedFeb 22, 2026 -
IBDVerse-sc-eQTL-code Public
Forked from andersonlab/IBDVerse-sc-eQTL-codeCode for doing minor analyses related to the IBDverse sc-eQTL propject
R UpdatedFeb 19, 2026 -
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CyclicMPNN Public
Forked from ParisaH-Lab/CyclicMPNNA fine-tuned version of ProteinMPNN for generating stable cyclic peptide sequences
Jupyter Notebook MIT License UpdatedFeb 2, 2026 -
alphagenome Public
Forked from XinmingTu/alphagenomeImplementation of AlphaGenome, Deepmind's updated genomic attention model
Python MIT License UpdatedFeb 1, 2026 -
ODesign-pipeline Public
Forked from OTeam-AI4S/ODesign-pipelinedesign pipeline for protein, nucleic acid, and small molecule
Python Apache License 2.0 UpdatedJan 21, 2026 -
PPIFlow Public
Forked from Mingchenchen/PPIFlowde novo design of high affinity biological binders
Python Other UpdatedJan 20, 2026 -
origin-1 Public
Forked from AbSciBio/origin-1Origin-1: a generative AI platform for de novo antibody design against novel epitopes
MIT License UpdatedJan 16, 2026 -
variantformer Public
Forked from czi-ai/variantformerVariantFormer: A hierarchical transformer integrating DNA sequences with genetic variations
Python MIT License UpdatedJan 13, 2026 -
ADAPT Public
Forked from phbradley/ADAPTAntigen-receptor Design Against Peptide-MHC Targets
Python MIT License UpdatedJan 9, 2026 -
Medea Public
Forked from mims-harvard/MedeaMedea: An omics AI agent for therapeutic discovery
Python Apache License 2.0 UpdatedDec 28, 2025 -
HalluDesign Public
Forked from MinchaoFang/HalluDesignHalluDesign, a hallucination-driven all-atom framework for the iterative co-optimization and co-design of protein sequences and structures by leveraging the forward pass of a structure prediction m…
Python MIT License UpdatedDec 26, 2025 -
FLAb Public
Forked from Graylab/FLAbFitness landscapes for antibodies
Python Other UpdatedDec 23, 2025 -
scldm Public
Forked from czi-ai/scldmsingle-cell latent diffusion model
Python MIT License UpdatedDec 22, 2025