Source code for OpenCOVID, an individual-based model of SARS-CoV-2 transmission and COVID-19 disease dynamics.

An experimental and unofficial wrapper for interacting with OpenAI GPT models in R.

Online material for the Perspective: "Julia for Biologists" presented at JuliaCon 2021: https://www.youtube.com/watch?v=gRj7E5kYG1I

Generates figures in the manuscript titled A Quantitative Systems Pharmacology Model of the Pathophysiology and Treatment of COVID-19 Predicts Optimal Timing of Pharmacological Interventions

Package for fitting models according to the deep compartment modeling framework for pharmacometric applications.

Pulling CDC data on state vaccination progress

comparing stand up comedians using natural language processing

Mathematica notebook containing the code to reproduce time series simulations of activated T-cell and tumor cell populations of our mathematical model.

Koç University deep learning framework.

Text and code for the second edition of Think Bayes, by Allen Downey.

Deep learning with cats (^._.^)