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Awesome-AI-Virtual-Cell: A curated list of papers, datasets, benchmarks, talks, and community resources for AI-powered virtual cell research.

Jupyter Notebook 211 17 Updated Mar 29, 2026

Virtual Cell Framework

Java 116 30 Updated Apr 10, 2026

Arc Virtual Cell Atlas

Jupyter Notebook 510 51 Updated Feb 12, 2026

Transfer learning / domain adaptation / domain generalization / multi-task learning etc. Papers, codes, datasets, applications, tutorials.-迁移学习

Python 14,319 3,843 Updated Feb 18, 2025

Portfolio optimization with deep learning.

Python 1,124 160 Updated Jan 24, 2024

Randomized Matrix Decompositions using R

R 102 24 Updated Apr 13, 2021
R 869 534 Updated Oct 18, 2022

The Single-Cell Pathology Landscape of Breast Cancer

MATLAB 27 5 Updated Jan 14, 2020

A pixel classification based multiplexed image segmentation pipeline

Jupyter Notebook 106 37 Updated Dec 5, 2023

Applied Computational Genomics Course at UU: Spring 2020

HTML 1,079 240 Updated Apr 5, 2024

Machine learning for transportation data imputation and prediction.

Jupyter Notebook 1,284 303 Updated Feb 20, 2026

Collection of public scRNA-Seq datasets used by our group

R 172 59 Updated May 4, 2021

Collection of reproducible deep learning for compressive sensing

718 157 Updated Nov 9, 2023

An actionable database of publicly available single-cell RNA-seq data

Jupyter Notebook 41 8 Updated Apr 13, 2019

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,705 1,079 Updated Apr 7, 2026

Scripts to recreate figures from the SC3 paper

R 41 16 Updated Mar 1, 2017

A curated list of resources for learning bioinformatics.

509 126 Updated Feb 23, 2022

Master the command line, in one page

160,494 14,792 Updated Jun 25, 2024

machine learning and deep learning tutorials, articles and other resources

17,711 3,983 Updated Jun 12, 2024

a curated list of R tutorials for Data Science, NLP and Machine Learning

R 2,084 876 Updated Mar 10, 2023
Python 3,305 1,044 Updated Jun 8, 2022

Deep Learning for humans

Python 63,961 19,740 Updated Apr 10, 2026

Easy-to-use library for logging training progress of TensorFlow

Python 5 1 Updated Mar 27, 2018

TensorFlow LSTM-autoencoder implementation

Python 192 56 Updated Jan 16, 2018

A short script for converting .csv file data into an .fcs file, and vise versa.

R 18 16 Updated Apr 2, 2021

Gluon CV Toolkit

Python 5,918 1,209 Updated Nov 25, 2024

MLSS 2018 Madrid lecture materials on Generative Adversarial Networks (GANs)

Jupyter Notebook 179 68 Updated Mar 16, 2020

100 Days of ML Coding

50,433 11,438 Updated Dec 29, 2023

吴恩达老师的机器学习课程个人笔记

HTML 36,669 11,168 Updated Aug 25, 2025
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