Scikit-Longitudinal (Sklong) your tailored (health) Longitudinal machine learning library built on top of Scikit-Learn

Example deep learning projects that use wandb's features.

Code base of 'PAPER2WEB: LET’S MAKE YOUR PAPER ALIVE!' integrating the other work package throughout the entire "paper2present" process.

High-Resolution Image Synthesis with Latent Diffusion Models

sf-pediatric is an end-to-end connectomics pipeline for pediatric (0-18y) dMRI and sMRI brain scans.

Self-supervised Longitudinal Neighbourhood Embedding (LNE), MICCAI2021 & Speicial Issue on Medical Image Analysis

[MICCAI, 2024] (Oral, RU @ MedIA Best Paper Award) Official implementation of the Brain Latent Progression (BrLP) method from "Enhancing Spatiotemporal Disease Progression Models via Latent Diffusi…

Denoising Diffusion Implicit Models

Treatment-aware Diffusion Probabilistic Model for Longitudinal MRI Generation and Diffuse Glioma Growth Prediction

A collection of resources and papers on Diffusion Models

Medical Diffusion: This repository contains the code to our paper Medical Diffusion: Denoising Diffusion Probabilistic Models for 3D Medical Image Synthesis

The official implementation of our IPMI 2023 paper "SADM: Sequence-Aware Diffusion Model for Longitudinal Medical Image Generation"

A newly developed model Regional Deep Atrophy (RDA) as a Self-Supervised Learning Method to Automatically Identify Regions Associated with Alzheimer’s Disease Progression from Longitudinal MRI

This repository contains code to apply vision transformers on surface data

Courseware for the ilumr educational MRI system

A re-implementation of antsMultivariateTemplateConstruction2.sh using optimized image pyramid scale-space and qbatch support

Results and manuscript for the Healthy Brain Network preprocessed open diffusion derivatives (HBN-POD2) study

Example 📓 Jupyter notebooks that demonstrate how to build, train, and deploy machine learning models using 🧠 Amazon SageMaker.

Soft-intro-VAE-for-3D-MRI

Jupyter notebooks for learning how to use SimpleITK

A variational autoencoder for volumetric shape generation