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1. Commits on May 18, 2017

   • add the missing argument of the example

     A-Tsai

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2. Commits on May 16, 2017

   • removed assert(23) for issue #7

     

     walaj

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3. Commits on Apr 14, 2017

   • updated refilter to better handle DBSNP

     

     walaj

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4. Commits on Apr 5, 2017

   • renamed thread workers to be more descriptive

     

     walaj

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5. Commits on Mar 26, 2017

   • simplified read group handling. non-human data support. improved cov model

     

     walaj

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6. Commits on Mar 24, 2017

   • improved read tracking in BreakPoint (new issue from last commit)

     

     walaj

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7. Commits on Mar 23, 2017

   • merged svabaRead branch into master (better mem handling)

     

     walaj

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   • simplified r2c alignments. small mem fix for BFC correction

     

     walaj

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8. Commits on Mar 2, 2017

   • Merge branch 'master' of https://github.com/walaj/svaba

     

     walaj

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   • switching over to svabaRead

     

     walaj

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   • naming issue in refilter

     

     walaj

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   • Merge branch 'master' of https://github.com/walaj/svaba

     

     walaj

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   • improved accuracy for balanced translocations

     

     walaj

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9. Commits on Feb 6, 2017

   • Merge branch 'master' of https://github.com/walaj/svaba

     

     walaj

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   • more clear error message on giving bad region input with -k

     

     walaj

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10. Commits on Feb 5, 2017

    • updated README and install target

      

      walaj

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11. Commits on Feb 4, 2017

    • typo in Makefile.am

      

      walaj

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12. Commits on Feb 3, 2017

    • updated README

      

      walaj

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13. Commits on Jan 30, 2017

    • ran automake

      

      walaj

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    • Merge pull request #3 from gaog94/patch-1

      Show description for a3c6b3e
      

      Jeremiah Wala

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    • Update Makefile.am

      gaog94

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14. Commits on Jan 27, 2017

    • documentation update

      

      walaj

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    • added travis build badge

      

      walaj

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    • updated README

      

      walaj

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    • build fix

      

      walaj

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    • name change to SVaBA

      

      walaj

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15. Commits on Jan 19, 2017

    • minor improvements to memory stabilization for 10X samples

      

      walaj

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16. Commits on Jan 5, 2017

    • fixed dedupe issue in VCF, type bug for REPSEQ of 8

      

      walaj

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17. Commits on Dec 30, 2016

    • COMPL > TSI_L and TSI_G

      

      walaj

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18. Commits on Dec 20, 2016

    • removed debug print. VCF header fix. Better event de-duping

      

      walaj

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19. Commits on Dec 19, 2016

    • dbsnp missing from indel header. cleaned some code

      

      walaj

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20. Commits on Dec 11, 2016

    • removed debug print in sbw

      

      walaj

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    • reduce strictness of short DSCR

      

      walaj

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    • better isize cutoff for small discordant clusters

      

      walaj

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21. Commits on Dec 1, 2016

    • updated SeqLib

      

      walaj

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