Stars
Easily generate information-rich, publication-quality tables from R
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…
LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.
Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
🗻 Fuji plot—a circos representation of multiple GWAS results— 🗻
Visualization of Colocalization Between eQTL and GWAS Data
Enrichment Networks for Pathway Enrichment Analysis
Fine-tuning polygenic risk score models using GWAS summary statistics
This is a general (somewhat comprehensive) description of the LNG GWAS pipeline which can be used to guide researchers on how-to run a GWAS.
R package to perform Bayesian Genome-Wide Association Studies
Basic and fast GWAS functions for QQ and Manhattan plots (incl. gene names)
A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizing results
Illumina Human Methylation EPIC annotation to use with IlluminaHumanMethylationEPICB5manifest and minfi
Visualisation application for Klebsiella genotypes generated by Kleborate.
shinyÉPICo is a graphical and interactive pipeline to analyze Illumina DNA Methylation Arrays and to find Differentially Methylated CpGs