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🤗 smolagents: a barebones library for agents that think in code.

Python 24,519 2,198 Updated Dec 21, 2025

This repository contains the Hugging Face Agents Course.

MDX 24,318 1,716 Updated Nov 17, 2025

Development of updated university curriculums to meet in demand and emerging data science skills using web-scraping, machine learning, and agentic AIb-scraping

Python 1 Updated Aug 7, 2025

https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1

Jupyter Notebook 4,334 2,503 Updated Dec 17, 2025

unet for image segmentation

Jupyter Notebook 4,862 2,012 Updated Apr 10, 2024

ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy

Jupyter Notebook 621 141 Updated Dec 8, 2025

Tiktorch

Python 12 10 Updated Jul 14, 2025

This is the official implementation of our publication "Deep learning enables fast and dense single-molecule localization with high accuracy" (Nature Methods)

Python 117 30 Updated Jun 22, 2023

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

Python 166 75 Updated Jul 21, 2025

HDR exposure merging

C++ 410 82 Updated Apr 26, 2025

CellProfiler tutorial pipelines and images

Jupyter Notebook 98 86 Updated Oct 27, 2025

An open-source application for biological image analysis

Python 1,077 414 Updated Dec 19, 2025
MATLAB 2 1 Updated Dec 18, 2020

Utilities to visualise and create matplotlib colormaps and various color codecs

Jupyter Notebook 36 8 Updated Oct 14, 2025

Access to Biological Web Services from Python.

Python 325 67 Updated Dec 6, 2025

Training of boolean logic models of signalling networks using prior knowledge networks and perturbation data.

R 13 3 Updated Nov 24, 2025

Training of logic models of signalling networks using prior knowledge networks and perturbation data.

Jupyter Notebook 10 3 Updated Mar 11, 2020