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Commits on Dec 3, 2022

• adjusting main and makefile

  GANTR0N

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• Branch for GPU parallelization

  GANTR0N

  committed
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Commits on Oct 7, 2019

• Merge pull request #74 from rrwick/master

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  lh3

  authored
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Commits on Oct 3, 2019

• Explicitly add circularising links to unitig GFA

  rrwick

  committed
  6b06e25

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Commits on Jul 12, 2019

• clarified "0-based"; resolves #72

  lh3

  committed
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Commits on Jul 24, 2018

• fixed error in readme

  lh3

  committed
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• Release miniasm-0.3 (r179)

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  lh3

  committed
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• updated README for minimap2

  lh3

  committed
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Commits on Mar 30, 2018

• clarify that col10 and col11 can be inaccurate

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  lh3

  committed
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Commits on Nov 5, 2017

• take ref as X-axis; fixed a coor bug

  lh3

  committed
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Commits on Jul 21, 2017

• Merge branch 'master' of github.com:lh3/miniasm

  lh3

  committed
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• script to eval overlap sensitivity

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  lh3

  committed
  146e8b0

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• optionally attach read names for mhap2paf

  lh3

  committed
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Commits on Jul 18, 2017

• Merge pull request #28 from mcshane/paf_open_check

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  lh3

  authored
  46243f6

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• check file handle from paf_open exists

  mcshane

  committed
  17dff38

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• check SEQ and QUAL length for unmapped

  lh3

  committed
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Commits on Jul 12, 2017

• sam2paf optionally converts primary only

  lh3

  committed
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Commits on Jul 5, 2017

• r168: last commit has a compiling error

  lh3

  committed
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• r167: -p sg output gfa1 compatible GFA

  lh3

  committed
  3217c1b

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• r166: fixed a harmless typo

  lh3

  committed
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Commits on Jul 2, 2017

• Merge branch 'master' of github.com:lh3/miniasm

  lh3

  committed
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• work with SAM generated by blasr

  lh3

  committed
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Commits on Jul 1, 2017

• also test reference length

  lh3

  committed
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• test invalid cigars and too many cigars

  lh3

  committed
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Commits on Jun 12, 2017

• Merge pull request #23 from rikuu/master

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  lh3

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Commits on Jun 9, 2017

• only merge read selection passes when both enabled

  rikuu

  committed
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Commits on Mar 10, 2017

• r159: fixed an integer overflow via voutcn@b39d757

  lh3

  committed
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Commits on Feb 1, 2016

• r158: resumed versioning

  lh3

  committed
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Commits on Jan 30, 2016

• removed a duplicated entry

  lh3

  committed
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Commits on Jan 29, 2016

• revert a version close to r104

  lh3

  committed
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• removed chimeric detection - not working as intend

  lh3

  committed
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• another way to discard weak overlap

  lh3

  committed
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Commits on Jan 27, 2016

• optionally discard weak overlap (not by default)

  lh3

  committed
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Commits on Jan 25, 2016

• keep and output the matching ratio

  lh3

  committed
  17d5bd1

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• adjust both ml and bl after trimming

  lh3

  committed
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