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1. gymnoTOA-app gymnoTOA-app Public

   gymnoTOA-app enables users to download gymnoTOA-db and execute a comprehensive functional annotation pipeline for high-throughput sequencing-derived DNA or cDNA sequences.

   Python 2

2. gtImputation gtImputation Public

   gtimputation (Genotype Imputation) is an application designed to determine the genotypes of missing data in a VCF or tabular format file using a machine learning procedure based on self-organizing …

   Python 2

3. TOA TOA Public

   TOA (Taxonomy-oriented Annotation) establishes workflows geared towards plant species that automate the extraction of information from genomic databases and the annotation of sequences.

   Python 5 4

4. ddRADseqTools ddRADseqTools Public

   Software package for in silico simulation and testing of double digest RADseq experiments.

   Python 19 4

5. NGShelper NGShelper Public

   NGShelper is a set of tools useful to performance some tasks related to NGS analysis.

   Python 6 1

6. RADdesigner RADdesigner Public

   Bioinformatic workflow to choose the optimal genotyping strategy using RADs (ddRADseq-GBS) from individual-replicates pilot studies

   R 2