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How to improve BUSCO with TSEBRA

Status: Open.

#53 In Gaius-Augustus/TSEBRA;

· Abieskawa opened on Dec 13, 2024

Combine BRAKER3 and Galba annotation for new, non-model genome

Status: Open.

#51 In Gaius-Augustus/TSEBRA;

· YanisChrys opened on May 21, 2024

Combining runs of BRAKER3 with short and long-read RNA-seq

Status: Open.

#50 In Gaius-Augustus/TSEBRA;

· danielwood1992 opened on Apr 26, 2024

Execution issue still persists with <code>get_longest_isoform.py</code>

Status: Open.

#49 In Gaius-Augustus/TSEBRA;

· sahoo-rk opened on Mar 6, 2024

Still need to remove redundant sequences after gtf files recombination?

Status: Open.

#46 In Gaius-Augustus/TSEBRA;

· Flyase opened on Feb 15, 2024

Confusion about the default config parameters

Status: Open.

#45 In Gaius-Augustus/TSEBRA;

· sjannielefevre opened on Jan 4, 2024

The TSEBRA result to UCSC or Ensemble type

Status: Open.

#39 In Gaius-Augustus/TSEBRA;

· ld9866 opened on Nov 20, 2023

long_reads branch issue

Status: Open.

#36 In Gaius-Augustus/TSEBRA;

· gbdias opened on Oct 9, 2023

Combining TSEBRA Output with other Annotations in GFF format

Status: Open.

#35 In Gaius-Augustus/TSEBRA;

· NicMAlexandre opened on Aug 21, 2023

TSEBRA failed with keep_ab_initio.cfg (but worked with default.cfg)

Status: Open.

#28 In Gaius-Augustus/TSEBRA;

· Huiting120 opened on Feb 7, 2023

Number of genes predicted with TSEBRA is more while BUSCO score remains the same

Status: Open.

#25 In Gaius-Augustus/TSEBRA;

· ShakunthalaNatarajan opened on Nov 15, 2022

How to improve the BUSCO score of the resulted predictions?

Status: Open.

#19 In Gaius-Augustus/TSEBRA;

· bioinformaticspcj opened on Jun 27, 2022