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πŸ’« About Me:

  • πŸ”­ Pursuing a Master's in Data Science and Information Technologies with a specialization in Bioinformatics and Biomedical Data Science at the National and Kapodistrian University of Athens, Greece.
  • 🧬 Conducting my thesis in metagenomics under the supervision of Georgios Pavlopoulos and Fotis Baltoumas at the BSRC Alexander Fleming, Athens, Greece.
  • πŸ”¬ Designed and implemented computational pipelines and machine learning approaches for analyzing biological data, including single-cell RNA sequencing, protein structure prediction, genetic variant detection, time series forecasting, and image analysis, with applications spanning cancer research, genomics, and data-driven healthcare solutions.
  • 🀝 Open to collaborating on innovative bioinformatics, data science, and machine learning projects.
  • 🌐 All of my projects are available here.

🌐 Socials:

LinkedIn Email

πŸ’» Tech Stack:

  • Programming Languages:
    Python Shell Script R MATLAB Perl
  • Development Tools:
    Git Anaconda Notion Microsoft Office LaTeX Markdown
  • Data Science & Machine Learning:
    NumPy Pandas scikit-learn scikit-image Optuna UMAP-learn SciPy TensorFlow Keras PyTorch
  • Data Visualization:
    Plotly Matplotlib Seaborn Pillow
  • Operating Systems & Platforms:
    Windows Terminal Linux MySQL

🧬 Bioinformatics Tools:

  • Sequence Analysis & Variant Calling:
    GATK SAMtools BCFtools BWA bedtools snpEff
  • Protein Structure Prediction:
    AlphaFold Rosetta Abinitio
  • Molecular Dynamics Simulation:
    NAMD VMD mdtraj
  • Multiple Sequence Alignment:
    MAFFT MUSCLE
  • Sequence Homology & Search:
    BLAST LAST DIAMOND HMMER
  • Sequence Search & Clustering:
    MMseqs2
  • Protein Structure Comparison & Search:
    Foldseek
  • Structural Visualization & Analysis:
    PyMOL ChimeraX XMGrace Maestro Suite
  • Single-Cell RNA Analysis:
    anndata scanpy
  • Functional Enrichment & Profiling:
    gProfiler
  • Programming Libraries:
    Biopython

πŸ“Š GitHub Stats:





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