Stars
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
Rmd source files for the HarvardX series PH525x
Official code repository for GATK versions 4 and up
my notes for scATACseq analysis
An Efficient RML-Compliant Engine for Knowledge Graph Construction
Training material for introductory R / Bioconductor courses
Bioconductor facilities for parallel evaluation
[DEPRECATED] Docker containers for Bioconductor
Course material for introductory R / Bioconductor courses
[DEPRECATED, see https://immunarch.com/] tcR: an R package for immune receptor repertoire advanced data analysis.
Deprecated see https://github.com/MHH-RCUG/nf_wochenende : A whole Genome/Metagenome Sequencing Alignment Pipeline in Python3
Mycobacterium tuberculosis next generation sequence analysis
Training material for intermediate R / Bioconductor courses
A tool for investigating alternative mRNA splicing in next generation mRNA sequence data.
Materials for the RStudio joint webinar with Appsilon Data Science 'Enabling Your Distributed Data Science Team'
IDEEL pipelines for next-generation sequence quality control and analysis
Locate, error-correct, trim, and organize (hierarchically) sequence-tagged next-generation DNA reads
Estimating time of HIV-1 infection from next-generation sequence diversity (code and data)