Code Implementation for JointVesselNet (MICCAI 2020) & VC-Net (IEEE TVCG SciVis 2020)

Segmentation Precision Optimised with Continuity Knowledge using Maximum Intensity Projection

Neuroimaging analysis and visualization suite

SAMRI: Segment Anything Model for MRI

Segmentation method for cerebral blood vessels from MRA using hysteresis

Synthetic Vessel Generator for the generation of synthetic cerebral vessel labels.

Voreen - The Volume Rendering Engine

Stand alone fMRI software suite for layer-fMRI analyses.

Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)

Pre-trained models and utilities for deep learning on medical images in Python (Keras/TensorFlow)

Website for the OHBM Open Science Special Interest Group

The world’s fastest framework for building websites.

💫 Toolkit to help you get started with Spec-Driven Development

Medical image processing in Python

ITK-SNAP medical image segmentation tool

This is an official implementation of the MICCAI2024 paper "Self-supervised 3D Skeleton Completion for Vascular Structures".

Python module to analyse skeleton (thin object) images

DeepRetinotopy - General toolbox for predicting human retinotopic maps

Computational pipeline for whole mouse brain vascular connectome reconstruction and analysis

Memray is a memory profiler for Python

Application for managing recipes, planning meals, building shopping lists and much much more!

12 Weeks, 24 Lessons, AI for All!

3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)

Fast methods to work with hydro- and topography data in pure Python.

Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning

An Industrial-Level Controllable and Efficient Zero-Shot Text-To-Speech System

Jerman's tubular (vessel) and spherical (blob) enhancement filters

Brainchop: In-browser 3D MRI rendering and segmentation