Starred repositories
Repository for suggesting new lineages that should be added to the current scheme
Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
Implement a ChatGPT-like LLM in PyTorch from scratch, step by step
ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.
TeachOpenCADD: a teaching platform for computer-aided drug design (CADD) using open source packages and data
This is the KSICHT annual chemistry competition website that allows elementary and high schools students to show off theirs skills on a challenging tasks.
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology
Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
Software package for assigning SARS-CoV-2 genome sequences to global lineages.
A web platform to detect and analyze variants of SARS-CoV-2
Deep learning for molecules and materials book
A dependency-free cross-platform swiss army knife for PDB files.
A repository to describe the RS quality indicators used in the EVERSE project
MOLEonline is a fast service for calculating tunnels and pores in biomacromolecular structures
VIP cheatsheet for Stanford's CME 295 Transformers and Large Language Models
Automatic MARTINI parametrization of small organic molecules
Robust representation of semantically constrained graphs, in particular for molecules in chemistry
In silico chemical library engine for high-accuracy chemical property prediction
Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
code for SeqDance/ESMDance, biophysics-informed protein language models
Repository for the molecular structures related with Corona virusses and their re-processing
Report salient qPCR primer/probe or immune epitope mismatches info against a set of pathogen isolate genomes
This OpenSCAD library was created to make it easy to create board game inserts with lids for either horizontal or vertical storage, without any programming required.
PENSA - a collection of python methods for exploratory analysis and comparison of biomolecular conformational ensembles.
A Knowledge Graph of Common Chemical Names to their Molecular Definition