temp repo for NeuralMI Libraray

A Python interface to access neuroanatomical atlases

Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.

Fast spike sorting with drift correction

Julia wrapper for Zilany, Bruce, Carney (2014) auditory-nerve model

Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.

a visualization method for neural data

Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework

Segment Anything for Microscopy

Massively-parallel exact nearest neighbor search in Julia.

Continuous-Time Event-based Transfer Entropy

Algorithms for quantifying associations, independence testing and causal inference from data.

A Python-based module for creating flexible and robust spike sorting pipelines.

A simple way to make HTML websites

🐢 personal site

Holmes-Nemenman modified KSG continuous entropy estimator

R package to extract muscle synergies from electromyogram

Remote heart rate detection through Eulerian magnification of face videos

💪 Analysis of work loops and other data from muscle physiology experiments