Highlights
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Starred repositories
ExperimentHub collection of imaging mass cytometry datasets
A general repository for an -omics hackathon being held in Venice!
Documentation relating to the new build system and GitHub hosted repositories
Open-source data framework for biology. Context and memory for datasets and models at scale. Query, trace & validate with a lineage-native lakehouse that supports bio-formats, registries & ontologi…
Materials for PUBH614: Quantitative and Qualitative Data Analysis Methods in Public Health Research
Quarto extension for INRAE Templates
Matrix-like representations of mutation and CN data
GitHub Actions for developing and maintaining Bioconductor packages
Toolbox package for organizing and working with TCGA data
A template to create CVs/Resumes with Quarto
This is a repository for the LinkedIn Learning course Learning Kubernetes
scPortrait is a scalable toolkit to generate single-cell representations from raw microscopy images
Probabilistic cell segmentation for in situ spatial transcriptomics
An extremely fast Python package and project manager, written in Rust.
Powerful system-level package manager for Linux, macOS and Windows written in Rust – building on top of the Conda ecosystem.
rapids-singlecell: GPU-accelerated framework for scRNA analysis