Effortless data labeling with AI support from Segment Anything and other awesome models.

Simplify camera trap image analysis with AI species recognition models based around the MegaDetector model

Turn any PDF or image document into structured data for your AI. A powerful, lightweight OCR toolkit that bridges the gap between images/PDFs and LLMs. Supports 100+ languages.

Python Fire is a library for automatically generating command line interfaces (CLIs) from absolutely any Python object.

Precision Time Protocol Synchronization Service for Windows

Modin: Scale your Pandas workflows by changing a single line of code

TRex, a fast multi-animal tracking system with markerless identification, and 2D estimation of posture and visual fields.

Command line tools for working with MyST Markdown.

A Bonsai library for interfacing with Basler cameras using the pylon SDK

Statistical package in Python based on Pandas

Analysis for spatially modulated spiking activity, e.g. place cells, grid cells

A multi-species, multi-ephys format histology processing and probe alignment pipeline

UnitRefine is a machine-learning toolbox that simplifies spike sorting curation by reducing manual curation.

Distance-based Analysis of DAta-manifolds in python

An opinionated list of awesome Python frameworks, libraries, software and resources.

Cycle-by-cycle analysis of neural oscillations.

Jupyter Notebook Conversion

R code and materials used for presenting workshop on conducting common analyses in animal movement ecology.

Documentation that simply works

MATLAB Integration for Jupyter enables you to run MATLAB code in Jupyter Notebooks and other Jupyter environments. You can also open MATLAB in a browser directly from your Jupyter environment to us…

Behavioral Observation Research Interactive Software

Package management made easy

Quickly and accurately render even the largest data.

Fast optimisation of tuning curves by iterative refitting and decoding

A python parametric CAD scripting framework based on OCCT

Kepler Mapper: A flexible Python implementation of the Mapper algorithm.

Plots instantaneous power spectral densities of LFP data across arena animal has visited.

NEural MOdelS, a statistical modeling framework for neuroscience.

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

Dynamical Similarity Analysis code accompanying the paper "Beyond Geometry: comparing the temporal structure of computation in neural circuits via dynamical similarity analysis"