A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Make Complex Heatmaps

A reactive notebook for Python — run reproducible experiments, query with SQL, execute as a script, deploy as an app, and version with git. Stored as pure Python. All in a modern, AI-native editor.

Computer vision assisted tool to extract numerical data from plot images.

CRISPR discovery pipeline

JupyterLab computational environment.

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the …