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A deep learning package for many-body potential energy representation and molecular dynamics

Python 1,900 602 Updated Mar 31, 2026

Powerful AI Client

TypeScript 39,207 3,986 Updated Mar 31, 2026

an automatic reaction network generator for reactive molecular dynamics simulation

Python 97 46 Updated Mar 30, 2026

Collective variables library for molecular simulation and analysis programs

C++ 236 61 Updated Mar 30, 2026

Packmol - Initial configurations for molecular dynamics simulations

Fortran 348 60 Updated Mar 30, 2026

DuMux: an open-source simulator for flow and transport processes in porous media (repository mirrored from https://git.iws.uni-stuttgart.de/dumux-repositories/dumux.git)

C++ 44 16 Updated Mar 30, 2026

This software is a general purpose classical simulation package. Online documentation available at:

C++ 92 24 Updated Mar 30, 2026

Free ChatGPT&DeepSeek API Key,免费ChatGPT&DeepSeek API。免费接入DeepSeek API和GPT4 API,支持 gpt | deepseek | claude | gemini | grok 等排名靠前的常用大模型。

Python 37,006 2,587 Updated Mar 6, 2026

Thermopack is a thermodynamic model library for fluid properties and PVT calculations

Fortran 97 24 Updated Feb 26, 2026

Sample codes for my book on molecular dynamics simulation

Jupyter Notebook 284 65 Updated Jan 26, 2026

Bilibili Downloader. 一个命令行式哔哩哔哩下载器.

C# 13,614 1,584 Updated Jan 10, 2026

Tool to read a logfile produced by LAMMPS into a pandas dataframe with a get_log("log.lammps")-function providing the log data.

Python 68 8 Updated Jan 8, 2026

GPT Meet Zotero.

TypeScript 7,017 311 Updated Dec 5, 2025

CrunchFlow

Fortran 29 4 Updated Sep 24, 2025

classical network flow simulation code written in python

Python 6 1 Updated Jul 31, 2025

Classical network (extraction and) flow simulation

C 50 18 Updated Jul 9, 2025

Some scripting tools used for lammps input or output

Python 65 23 Updated May 19, 2025

Equation of state for natural gas (several varieties) and mixtures with hydrogen. Also Moody plots for the calculation of the friction factor in rough pipes.

TeX 1 1 Updated Apr 8, 2025
C++ 41 12 Updated Jan 17, 2025

Classical molecular simulation code

C 165 90 Updated Jul 13, 2024

Python package to construct free energy profiles from biased molecular simulation data using both log-likelihood maximization and self-consistent iteration approaches.

Python 21 2 Updated Jun 27, 2024

On-the-fly calculation of Transport Properties

C++ 28 6 Updated Jun 19, 2023

The computational modeling tool for custom atomistic model of calcium-silicate-hydrates (C-S-H)

C++ 20 8 Updated May 14, 2023

official release of the LIGGGHTS® DEM software by DCS Computing. For further info, forums, and bug reports, please visit http://www.cfdem.com. For the DEM software Aspherix® by DCS Computing that r…

C++ 1 Updated Mar 27, 2023

A deep learning package for many-body potential energy representation and molecular dynamics

C++ 1 Updated Mar 16, 2023
Python 114 55 Updated Oct 13, 2022

Library for performing multiphase simulations (based on the Shan-Chen model) in complicated geometries (i.e. porous media 3D images)

C++ 1 Updated Jul 18, 2022

Coupling between the Lattice-Boltzmann code Palabos and the DEM code LIGGGHTS

C++ 72 42 Updated Mar 28, 2022
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