Ticket 306807.
- Job arrays and
srundo not go together (e.g. read here), I've changed this tosbatch - As now
assembling_metagenomes_array.shis used a job, I've addded some SBATCH/Slurm parameters. I've picked the minimal amount of resources (i.e. 1 CPU code), you can modify this at will - In the 'starter script' (I call it
submit_jobs.sh) you run a for-loop that submits jobs. This is a great idea! However, this for loop is what job arrays can replace. As you already have a for-loop, there is no need for a job array :-) - As
submit_jobs.shonly submits jobs, you can run it directly like./submit_jobs.sh. I've commented out the Slurm parameters