An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..

Accurate sample inference from amplicon data with single nucleotide resolution

A taxonomic toolbelt for R

📈 Financial statements in R

fastqcr: Quality Control of Sequencing Data

JAMP - Just Another Metabarcoding Pipeline

R mased batch sequence downloader, with primer development and in silico evaluation capabilities

Analysis with Profile Hidden Markov Models

Interface to the Bold Systems barcode webservice

Informatic Sequence Classification Trees

R package supporting interactive data access on BOLD

A reference database manager for R

Barcode, Audit & Grade System: An R-based web application for data mining, auditing and annotation of DNA barcode libraries.

An R package for creating taxonomic reference databases for metabarcoding studies

🐞 methods and data describing filtering COI datasets and database construction 🐛

ssPRIMER (or species-specific PRIMER) is a shiny based software tool that can be used to design species-specific primer sets and Taqman probes for qPCR assays.

[Dev] Nucleotide sequence analysis took kit - command line utilities for managing large volumes of nucleotide sequences based in the R-programming language.