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Starred repositories

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Multi-omics factor analysis v2

Python 61 31 Updated Jan 26, 2026

Build and run containers leveraging NVIDIA GPUs

Go 4,217 503 Updated Apr 1, 2026

Machine Learning in NeuroImaging (MLNI) is a python package that performs various tasks using neuroimaging data.

Python 1 Updated Jul 16, 2025

Multi-Omics Factor Analysis

R 391 64 Updated Feb 23, 2026

Combined cortical/subcortical atlases for xcp-d and qsiprep

HTML 27 6 Updated Aug 28, 2024
MATLAB 146 33 Updated Jul 5, 2025
MATLAB 725 419 Updated Mar 25, 2026

《动手学大模型Dive into LLMs》系列编程实践教程

Jupyter Notebook 25,252 2,967 Updated Oct 10, 2025
Jupyter Notebook 11 3 Updated Dec 22, 2025

Data and code supporting Hansen et al., 2022 Nature Neuroscience "Mapping neurotransmitter systems to the structural and functional organization of the human neocortex"

Python 122 33 Updated Oct 27, 2022

This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomography derived information

MATLAB 67 8 Updated Feb 26, 2026

The plug-and-play, browser-accessible, containerised data analysis environment.

Shell 62 21 Updated Apr 1, 2026

A suite of functions for reproducible causal mediation analyses

R 72 23 Updated Feb 17, 2025

Code for FID/SE hybrid MRSI reconstruction

MATLAB 8 1 Updated Apr 25, 2025

A game theoretic approach to explain the output of any machine learning model.

Jupyter Notebook 25,220 3,492 Updated Apr 1, 2026
Jupyter Notebook 28 9 Updated Apr 2, 2026

GLSL surface rendering source code. Compiled versions available from NITRC. Loads 3DS, CTM, DXF, FreeSurfer, GII (GIfTI), GTS, LWO2, MS3D, MZ3, NV (BrainNetViewer), OBJ, OFF, PLY, STL, VTK. Tractog…

Pascal 133 29 Updated Jul 24, 2025

Subtype and Stage Inference (SuStaIn) algorithm with an example using simulated data.

Jupyter Notebook 202 85 Updated Mar 30, 2026

个人中文简历 Latex 源码 https://hijiangtao.github.io/

TeX 3,013 688 Updated Sep 4, 2024
HTML 6 3 Updated Apr 21, 2020

⚠️ ARCHIVED — Moved to ggsegverse/ggsegHistorical

R 7 2 Updated Mar 31, 2026

Single-level and multi-level mediation analyses for any kind of data, with bootstrap-based significance testing. Neuroimaging-oriented functions allow for mediation effect parametric mapping (mappi…

HTML 90 32 Updated Mar 24, 2025

Software that functionally segments white matter connections to generate task-specific subcomponents of fiber bundles.

Python 10 4 Updated Jan 5, 2024

Comparative analysis of pairwise interactions in multivariate time series.

Python 252 34 Updated Feb 6, 2026

Highly Comparative Graph Analysis - Code for network phenotyping

Python 51 15 Updated Jun 4, 2024

Repository for the 2023 OHBM Hackathon

TypeScript 16 1 Updated Oct 29, 2025

A beautiful, simple, clean, and responsive Jekyll theme for academics

HTML 15,408 12,878 Updated Apr 2, 2026

PALM: Permutation Analysis of Linear Models

MATLAB 81 32 Updated Mar 15, 2026

The interactive graphing library for Python ✨

Python 18,409 2,792 Updated Mar 30, 2026

Productive, portable, and performant GPU programming in Python.

C++ 28,121 2,378 Updated Jan 5, 2026
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