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PCAofSNPs

This program performs Principal Component Analysis(PCA) on Single Nucleotide polymorphism (SNPs) data.
The data is from a geographically structured population with unknown number of subpopulations. The programme use PCA to determine the number of subpopulations and allocate individuals to each population. The progamme outputs a location.txt file which can be subsequently plotted to show the subpopulations.

The SNPs data are located at "https://www.cs.auckland.ac.nz/courses/compsci369s1c/resources/for-assig1/snps.txt"

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