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  • Westlake University
  • Hangzhou, Zhejiang
  • 15:47 (UTC +08:00)

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Starred repositories

39 stars written in Python
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Tensors and Dynamic neural networks in Python with strong GPU acceleration

Python 97,290 26,805 Updated Feb 10, 2026

Python tool for converting files and office documents to Markdown.

Python 86,648 5,027 Updated Jan 8, 2026

AiLearning:数据分析+机器学习实战+线性代数+PyTorch+NLTK+TF2

Python 42,029 11,611 Updated Nov 12, 2024

基于Python的开源量化交易平台开发框架

Python 36,320 10,853 Updated Jan 14, 2026

A hyperparameter optimization framework

Python 13,486 1,236 Updated Feb 10, 2026

Pocket Flow: Codebase to Tutorial

Python 12,055 1,384 Updated Oct 24, 2025

A PyTorch Extension: Tools for easy mixed precision and distributed training in Pytorch

Python 8,914 1,512 Updated Feb 9, 2026

AlphaFold 3 inference pipeline.

Python 7,579 1,101 Updated Feb 5, 2026

Tools for merging pretrained large language models.

Python 6,781 663 Updated Jan 26, 2026

Recommend new arxiv papers of your interest daily according to your Zotero libarary.

Python 4,617 4,096 Updated Feb 1, 2026

Code and hyperparameters for the paper "Generative Adversarial Networks"

Python 4,057 1,109 Updated May 25, 2020

Single-cell analysis in Python. Scales to >100M cells.

Python 2,346 709 Updated Feb 9, 2026

A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.

Python 830 178 Updated Jan 23, 2026

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

Python 729 81 Updated Feb 9, 2026

Gene Set Enrichment Analysis in Python

Python 690 136 Updated Dec 17, 2025

A unified multi-task time series model.

Python 613 88 Updated Sep 26, 2024

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

Python 416 70 Updated Jan 19, 2026

A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.

Python 265 63 Updated Dec 23, 2023

A scanpy extension to analyse single-cell TCR and BCR data.

Python 245 42 Updated Feb 9, 2026

A demo that implement image registration by matching SIFT descriptors and appling RANSAC and affine transformation.

Python 226 49 Updated Mar 5, 2023

Virtual Alignment of pathoLogy Image Series

Python 207 53 Updated Jun 25, 2025

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Python 129 524 Updated Mar 19, 2024

Thin wrapper around elastix - a toolbox for rigid and nonrigid registration of images

Python 110 30 Updated Apr 2, 2020

multimodal whole slide image registration in a graph structure

Python 100 8 Updated Jul 4, 2024

A deep learning toolkit for mass spectrometry

Python 87 25 Updated Jan 7, 2026

DeepLC: Retention time prediction for peptides carrying any modification.

Python 73 24 Updated Jan 13, 2026

Modular and user-friendly platform for AI-assisted rescoring of peptide identifications

Python 62 20 Updated Feb 9, 2026
Python 43 8 Updated Jun 11, 2024

[MICCAI 2024]Official implementation of "Pathological Semantics-Preserving Learning for H&E-to-IHC Virtual Staining"

Python 38 4 Updated Nov 20, 2025

Code for paper "Object landmark discovery through unsupervised adaptation"

Python 38 5 Updated Nov 14, 2019
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