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A full spaCy pipeline and models for scientific/biomedical documents.
Cancer-Alterome is a comprehensive and curated dataset that focuses on the investigation of regulatory events caused by gene alteration in the context of cancer.
Fine-tuning & Reinforcement Learning for LLMs. 🦥 Train OpenAI gpt-oss, DeepSeek-R1, Qwen3, Gemma 3, TTS 2x faster with 70% less VRAM.
BLAH9 project Accuracy assessment through consistency metrics
ML & Graph based tool for providing indicators scoring missense mutations to phenotypes
A Python package for the identification, characterization and comparison of spatial clusters from spatial -omics data.
A package to help convert different single-cell data formats to each other
Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com/:f:/g/personal/dalia_barkley_nyulangone_org/EuHetdAOc2pLjm9XUwq…
SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
Jupyter notebooks that support my graph data science blog posts at https://bratanic-tomaz.medium.com/
Software to implement GoT with a weviate vectorized database
SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
Clone of the Bioconductor repository for the SingleR package.
Deep probabilistic analysis of single-cell and spatial omics data
为英语学习者量身打造的视频播放器，助你通过观看视频、沉浸真实语境，轻松提升英语水平。#美剧 #播放器 #听力
Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data