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Does MXfold2 provide a predicted folding energy (ΔG-like value)?

Status: Open.

#26 In mxfold/mxfold2;

· YAFANZ opened on Dec 2, 2025

[bug report] Error of dealing with file extension when saving bpp file

Status: Open.

#25 In mxfold/mxfold2;

· heqin-zhu opened on Oct 2, 2025

DNA analysis

Status: Open.

#24 In mxfold/mxfold2;

· kabilov opened on Sep 17, 2025

Setting default value of log_dir for saving checkpoints every epoch

Status: Open.

#23 In mxfold/mxfold2;

· heqin-zhu opened on Dec 11, 2024

Batch inference

Status: Open.

#22 In mxfold/mxfold2;

· ardhe-qb opened on Oct 22, 2024

Changing folding model and seed doesn't change output

Status: Open.

#21 In mxfold/mxfold2;

· enc-kcotto opened on Jun 13, 2024

RuntimeError: [enforce fail at alloc_cpu.cpp:75] err == 0. DefaultCPUAllocator: can't allocate memory: you tried to allocate 132426121216 bytes. Error code 12 (Cannot allocate memory)

Status: Open.

#20 In mxfold/mxfold2;

· DooYal opened on Jun 6, 2024

mxfold2-0.1.1.tar.gz vs mxfold2-0.1.2.tar.gz

Status: Open.

#17 In mxfold/mxfold2;

· mpold opened on Oct 26, 2023

cannot import name 'interface' from 'mxfold2'

Status: Open.

#16 In mxfold/mxfold2;

· erik-whiting opened on Sep 11, 2023

Sequences > 1000 nt

Status: Open.

#12 In mxfold/mxfold2;

· nbrittain opened on Nov 29, 2022

Different with retrain param and default param

Status: Open.

#11 In mxfold/mxfold2;

· llfzllfz opened on Nov 12, 2022

Batch size

Status: Open.

#10 In mxfold/mxfold2;

· llfzllfz opened on Nov 12, 2022