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32 stars written in R
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Easily generate information-rich, publication-quality tables from R

R 2,148 221 Updated Feb 19, 2026

Machine Learning in R

R 1,679 404 Updated Aug 22, 2025

Circular visualization in R

R 1,012 150 Updated Nov 11, 2023

🎄Visualization and annotation of phylogenetic trees

R 927 184 Updated Apr 29, 2026

On top of spaghetti, all covered in cheese....

R 921 63 Updated Dec 7, 2025

Visualizations of distributions and uncertainty

R 879 31 Updated Apr 9, 2026

A grammar of graphics for comparative genomics

R 761 69 Updated Feb 23, 2026

Apply Mapping Functions in Parallel using Futures

R 743 38 Updated Mar 31, 2026

Data table backend for dplyr

R 675 61 Updated Feb 11, 2026

Lightning Fast Serialization of Data Frames for R

R 627 43 Updated Sep 26, 2024

Local Interpretable Model-Agnostic Explanations (R port of original Python package)

R 492 109 Updated Dec 11, 2025

Publication-ready volcano plots with enhanced colouring and labeling

R 462 86 Updated Dec 3, 2025

Fast Gene Set Enrichment Analysis

R 440 71 Updated Jan 2, 2026

R package implementation of Milo for testing for differential abundance in KNN graphs

R 428 26 Updated Apr 27, 2026

PCAtools: everything Principal Components Analysis

R 375 76 Updated Feb 2, 2026

R-package for structural equation modeling based on GWAS summary data

R 275 72 Updated Apr 3, 2026

*New maintainer/owner needed* Fast ICD-10 and ICD-9 comorbidities, decoding and validation in R. NB use main instead of master for default branch.

R 257 62 Updated Dec 5, 2025

R package for "sum of single effects" regression.

R 257 54 Updated Apr 28, 2026

R package for the analysis of massive SNP arrays.

R 220 46 Updated Aug 21, 2025

Bayesian model for clustering and enhancing the resolution of spatial gene expression experiments.

R 176 26 Updated Jan 8, 2026

High-definition likelihood inference of genetic correlations (HDL)

R 135 32 Updated Mar 15, 2026

An R package for multivariate adaptive shrinkage.

R 97 21 Updated Nov 7, 2024

🗻 Fuji plot—a circos representation of multiple GWAS results— 🗻

R 95 20 Updated May 29, 2025

LASSO for GWAS with summary statistics

R 79 24 Updated Sep 24, 2020

Cytometry dATa anALYsis Tools

R 76 32 Updated Apr 28, 2026

Tools for processing Nightingale NMR biomarker data in UK Biobank

R 63 6 Updated Apr 13, 2026

Send a long R job to be run aside

R 56 4 Updated Oct 31, 2017

Phenome Exome Association and Correlation Of Key phenotypes

R 35 7 Updated Aug 19, 2021

Prepare UK Biobank Electronic Health Record data for research

R 32 6 Updated Aug 31, 2022
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