AIND pipeline for processing extracellular electrophysiology data

Modelling human health trajectories using generative transformers

This repository contains advanced LLM-based chatbots for Q&A using LLM agents, and Retrieval Augmented Generation (RAG) and with different databases. (VectorDB, GraphDB, SQLite, CSV, XLSX, etc.)

Multi-omic single-cell optimal transport tools

Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2

inferring regulatory cellular dynamics

Multi-agent driven cell type annotation for single-cell RNA-Seq data stored in Anndata format

Single-cell analysis in Python. Scales to >100M cells.

Framework for Interpretable Neural Networks

CRISPSR-GPT LLM Agent Public Welcome Page

DeepSurv is a deep learning approach to survival analysis.

Chemcrow

Official Implementation of POYO-1 https://poyo-brain.github.io/

Prime editing guide RNA prediction

Loads environment variables from .env for nodejs projects.

Quality control for patch-seq data using marker genes

Streamlit — A faster way to build and share data apps.

100+ Fine-tuning LLM Notebooks on Google Colab, Kaggle, and more.

Kepler.gl is a powerful open source geospatial analysis tool for large-scale data sets.

Biomni: a general-purpose biomedical AI agent

Track reconstruction tool for Imairs. Because cells divide...

Build resilient language agents as graphs.

Auryn: A fast simulator for spiking neural networks with synaptic plasticity

LlamaIndex is the leading framework for building LLM-powered agents over your data.