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BuDDI model implementation

Python 4 5 Updated Dec 5, 2024

DRAGEN open-source mapper

C++ 180 38 Updated Sep 8, 2023

A collection of scripts for evaluating variant callers

Common Workflow Language 2 Updated Sep 18, 2018

Genome-wide Efficient Mixed Model Association

C++ 386 133 Updated Dec 10, 2025

RSYNC BACKUP MADE EASY

Shell 37 13 Updated Nov 21, 2025

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

C 1,683 568 Updated Mar 22, 2025

CKDGen R4 phenotype preparation script

R 8 6 Updated Oct 19, 2021

Runner pipelines

Perl 1 Updated Jun 30, 2020

Additional high-throughput sequencing autoQC steps

R 1 2 Updated Nov 10, 2015

Generic pipeline system

Perl 1 Updated Oct 28, 2015

Light version of Facebook. Light both in the weight and in the use.

Java 481 90 Updated Apr 7, 2025

BridgeBuilder efficiently remaps BAM/SAM reads to a new reference by first building a "bridge" reference, first mapping to that bridge, and then remapping only a subset of reads to the full new ref…

Shell 4 1 Updated Jul 16, 2015

trial project to learn rails 3.1

Ruby 2 Updated Nov 30, 2011

Port of actionwebservice (AWS) to the latest Rails version

Ruby 9 Updated Jun 10, 2010