Stars
Spec-driven development (SDD) for AI coding assistants.
Blazing-Fast Bioinformatic Operations on Python DataFrames
landaire / pickled
Forked from birkenfeld/serde-pickleRust (de)serialization for the Python pickle format.
NOT MAINTAINED - A simple Rust like Result type for Python 3. Fully type annotated.
High-performance UMI tools for NGS data analysis
A high-performance antibody and TCR sequence numbering tool for Rust, Python, Polars and JS/TS.
Fastest pure Rust implementation of LZ4 compression/decompression.
A Rust reimplementation of PyMOL molecular visualization
Command-line sampling profiler for macOS, Linux, and Windows
Perpetual is a high-performance gradient boosting machine. It delivers optimal accuracy in a single run without complex tuning through a simple budget parameter. It features out-of-the-box support …
job-ops: DevOps principles applied to job hunting. A self-hosted pipeline to track, analyze, and assist your application process
Rust implementation of Needleman-Wunsch & Smith-Waterman sequence alignment
Up to 100x faster strings for C, C++, CUDA, Python, Rust, Swift, JS, & Go, leveraging NEON, AVX2, AVX-512, SVE, GPGPU, & SWAR to accelerate search, hashing, sorting, edit distances, sketches, and m…
Fast tokenizer for language models, compatible with SentencePiece, Tokenizers, Tiktoken and more. Supports BPE, Unigram and WordPiece tokenization in JavaScript, Python and Rust.
Learned diffusion heuristics with GPU-accelerated search for short paths in large graphs.
A simplified implementation of DSSP algorithm for PyTorch and NumPy
A data modelling layer built on top of polars and pydantic
A fast TOML library for python implemented in rust.
🐍 Scan your Python dependencies for known security vulnerabilities with Rust-powered scanner
Awesome papers related to generative flow matching and its applications in bioinformatics. (Nature Machine Intelligence)