A bittorrent client in Rust

The uncompromising Python code formatter

Open source code for AlphaFold 2.

nim wrapper for htslib for parsing genomics data files

biogo high throughput sequencing repository

Copy number variant detection from targeted DNA sequencing

Software program for checking sample matching for NGS data

A structural variation pipeline for short-read sequencing

Aggregate results from bioinformatics analyses across many samples into a single report.

The Platinum Genomes Truthset

An open-source toolkit for large-scale genomic analysis

Validation and processing of GENIE files

cython + htslib == fast VCF and BCF processing

The next version of bwa-mem

Python 3 library with good support for both reading and writing VCF

🔬 Alignment workflow for Kids-First DRC

Script to automatically create and run IGV snapshot batchscripts

VarDict Java port

RNASeq Medullo Classifier for PBTA

R package for Medulloblastoma subtype classification

Set near-realtime picture of Earth as your desktop background

Workflow Description Language developer tools & local runner

Machine learning classifier to distinguish sequencing artifacts from true SNVs in pediatric cancers

Embeddable genomic visualization component based on the Integrative Genomics Viewer

Applied Computational Genomics Course at UU: Spring 2020

Fast and accurate gene fusion detection from RNA-Seq data

Fast fusion detection using kallisto

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment