Hello miRge team,

I encountered a KeyError while running miRge3.0 during the summarization step. The program crashed when trying to access the key 'Hsa-Mir-154-P4a_3p/P4b_3p' in the mirNameSeqDic dictionary within the a2i_editing function.

/workspace/wzh/miniconda3/envs/miRge3.0/bin/miRge3.0 -s "$input_files"
-db miRGeneDB
-lib /workspace/wzh/database/miRge3/
-on human
-ie
-cpu 16
-gff
-trf
-o /rawdata/chenwei/rPLM/mappingdata/miRNA
-m 15
-ai
-mEC
-nmir
-pbwt /workspace/software/bowtie/bowtie-1.3.1-linux-x86_64
-psam /usr/local/bin/
-prf /usr/local/bin/

bowtie version: 1.3.1
cutadapt version: 4.9
Samtools version: 1.21
RNAfold version: 2.4.16

Summarizing and tabulating results...
Traceback (most recent call last):
File "/workspace/wzh/miniconda3/envs/miRge3.0/bin/miRge3.0", line 8, in
sys.exit(main())
File "/workspace/wzh/miniconda3/envs/miRge3.0/lib/python3.8/site-packages/mirge/main.py", line 166, in main
summarize(args, workDir, ref_db, base_names, pdMapped, sampleReadCounts, trimmedReadCounts, trimmedReadCountsUnique)
File "/workspace/wzh/miniconda3/envs/miRge3.0/lib/python3.8/site-packages/mirge/libs/summary.py", line 1057, in summarize
a2i_editing(args, cannonical_4ie, isomirs_4ie, base_names, workDir, Filtered_miRNA_Reads, mirMergedNameDic, mirDic, ref_db, seqDic, onlyCanmiRNA)
File "/workspace/wzh/miniconda3/envs/miRge3.0/lib/python3.8/site-packages/mirge/libs/mirge2_tRF_a2i.py", line 1113, in a2i_editing
targetSeq = mirNameSeqDic[mirName]
KeyError: 'Hsa-Mir-154-P4a_3p/P4b_3p'