To access HITChip database from WUR database computer, do the following:

1. Login to the new database machine. It will ask two passwords during login. You can get these from the admins

2. Create a new output folder for profiling files. To do this, open the folder icon on the left panel, navigate to the "Users" directory and Create New Folder with right-mouse click.

3. Open terminal window (the black screen icon on the left panel).

4. Start R by giving the standard command 'R' in the terminal window.

To extract HITChip data, see these instructions.

To extract MITChip data, give the command in R:

library(HITChipDB) 
params <- run.profiling.script(dbuser = "mit", dbpwd = "passu", dbname = "phyloarray_mit")

This prompts you through profiling options described in full instructions.

To extract PITChip data (older chip), give the command in R:

library(HITChipDB) 
params <- run.profiling.script(dbuser = "pit", dbpwd = "passu", dbname = "phyloarray_pit")

This prompts you through profiling options described in full instructions.

To extract PITChip data (new chip), give the command in R:

library(HITChipDB) 
params <- run.profiling.script(dbuser = "pit", dbpwd = "passu", dbname = "pitchipdb")

This prompts you through profiling options described in full instructions.

To extract ChickChip data (older chip), give the command in R:

library(HITChipDB) 
params <- run.profiling.script(dbuser = "mit", dbpwd = "passu", dbname = "chickchipdb")

This prompts you through profiling options described in full instructions.