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written in Perl
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Trinity RNA-Seq de novo transcriptome assembly
Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
The Pathway Interaction Database (PID) is software supporting the access and display of information about bio-molecular interactions and cellular processes assembled into signaling pathways.
A computational framework to profile networks of distinct immune-cells from tumor transcriptomes