Emacs is my rifle. There are many editors like it, but this one is mine.
Without me, my rifle is useless. Without my rifle, I am useless.

I've been using Emacs for over 18 (since 2007) years now. This's my config file :-) it might be useful for someone. http://mmagnus.github.io/emacs-env/

Fig. Python Mode (python-outline - old)

Fig. Geekbook (Markdown) + Jupyter (IPython notebook)

I'm using:

• OrgMode http://orgmode.org/

• Markdown mode https://jblevins.org/projects/markdown-mode/ with https://github.com/mooreryan/markdown-dnd-images

• Darkroom mode https://github.com/joaotavora/darkroom

• Python:

  • python-mode.el https://www.emacswiki.org/emacs/ProgrammingWithPythonModeDotEl
  • pytest https://github.com/ionrock/pytest-el
  • flycheck (including pylint) On the fly syntax checking for GNU Emacs https://github.com/flycheck/flycheck
  • jedi autocompletion and static analysis library for python https://github.com/davidhalter/jedi
  • yasnippet snippets https://github.com/joaotavora/yasnippet
  • projectile https://github.com/bbatsov/projectile
  • magit git in Emacs https://github.com/magit/magit
  • sphinx-doc Generate Sphinx friendly docstrings for Python functions in Emacs https://github.com/naiquevin/sphinx-doc.el
  • sphinx-frontend provides a simple way to find closest Sphinx configuration file (conf.py) and run the Sphinx. https://github.com/kostafey/sphinx-frontend
  • ido-vertical-mode https://github.com/creichert/ido-vertical-mode.el
  • debugging with realgud https://github.com/realgud/realgud

• SoftDev

  • sometimes I'm switch on speedbar (sr-speedbar) https://www.emacswiki.org/emacs/SrSpeedbar but I think I prefere usually to keep it off because it cluters the frame. SrSpeedbar is a mode that makes SpeedBar show in the Current Frame, by SebastianRose.

• R

  • Emacs Speaks Statistics (ess) https://ess.r-project.org/

• RNA:

  • sequence alignment with Ralee http://sgjlab.org/ralee/

• PDB structure format:

  • pdb-mode https://github.com/mmagnus/emacs-pdb-mode

• writing: papers, reports, notes:

  • google-translate https://github.com/atykhonov/google-translate

• theme

  • powerline https://github.com/milkypostman/powerline

sphinx-doc https://github.com/naiquevin/sphinx-doc.el

C-c M-d # generate docstring for a given function

pip install jedi epc pylint


ln -s ~/workspace/emacs-env/dot-emacs.el ~/.emacs.el
ln -s ~/workspace/emacs-env/dot-emacs.d ~/.emacs.d

[mm] emacs-env git:(master) ✗ source test.sh

Andrea Crotti - Emacs and shell as your best friend /EuroPython 2013/ https://www.youtube.com/watch?v=0cZ7szFuz18 https://github.com/AndreaCrotti/minimal-emacs-configuration

Emacs as a Python IDE (package.el, jedi, auto-complete, projectile, sandbox as a vm) - https://www.youtube.com/watch?v=6BlTGPsjGJk and the repo for the talk https://github.com/wernerandrew/jedi-starter. Some lisp on the screen for configuration of jedi.

• https://www.emacswiki.org/emacs/PythonProgrammingInEmacs
• https://www.emacswiki.org/emacs/ProgrammingWithPythonDotElGallina
• https://www.emacswiki.org/emacs/ProgrammingWithPythonModeDotEl watch http://www.youtube.com/watch?v=0cZ7szFuz18

similar repos:

• http://www.enigmacurry.com/2008/05/09/emacs-as-a-powerful-python-ide/#
• https://github.com/jhamrick/emacs

Specific mode oriented keybindings:

(eval-after-load 'python-mode
'(define-key python-mode-map (kbd "<f8>") 'python-add-breakpoint))

Python mode keep windows intact:

'(py-keep-windows-configuration t)

The newest markdown-mode introduced markdown-max-image-size for resizing large images. It does the job! Emacs has to be compiled with ImageMagick support (--with-imagemagick). Read more https://emacs.stackexchange.com/questions/33952/iimage-mode-resize-an-image-in-markdown-mode-to-fit-the-window

C-ci iawriter
C-ct typora

shell (term) C-xt
emacs-lisp-mode: add C-c C-c (like with Python) and C-c r for eval-buffer and eval-region

Writing:
C-c D  turn on darkroom-mode

python-mode: python-outline Toggle entry is bound to C-c C-e, Toggle all is bound to C-c C-a, Show classes and defs only C-c o
python-mode:
  C-c u uncomment
  C-c # comment
sphinx-doc: C-c M-d
sphinx-frontend:
C-c h   sphinx-build-html   Compile rst files to html via sphinx
C-c l   sphinx-build-latex  Compile rst files to latex
C-c p   sphinx-run-pdflatex     Ad-hoc call pdflatex for LaTeX-builded documentation
magit: C-c g
shell (ansi-terminal): C-c m

# langtool
\C-c4w langtool-check
\C-c4W langtool-check-done
\C-c4l langtool-switch-default-language
\C-c44 langtool-show-message-at-point
\C-c4c langtool-correct-buffer

# pycoverge
\C-cc pycoverage-refresh

# pytest
\C-ca pytest-all
\C-cm pytest-module
\C-c. pytest-one
\C-cd pytest-directory
\C-cpa pytest-pdb-all
\C-cpm pytest-pdb-module
\C-cp. pytest-pdb-one

dnd() turn on markdown drag and drop
C-x n n narrow text
C-x n w widen text

C-c w iawriter

Evil Mode: Or, How I Learned to Stop Worrying and Love Emacs. Aaron Bieber from Wayfair is back to talk to us about his recent experience using Emacs (what?!?!). That's right, Emacs. Aaron decided it was time to see how things looked on the other side and will share what he found, what he missed from Vim, and maybe even a few things we can bring back to Vim from Emacs. https://www.youtube.com/watch?v=JWD1Fpdd4Pc

• write your own snippets for yasnippet http://longhorizon.org/blog/2013/03/31/improving-python-development-in-emacs-with-yasnippet/

• 170825 My first YASnippet! :-)
• 170318 sphinx-doc, sphinx-frontend, sphinx-mode
• 170308 add emacs & ipython notebook https://github.com/tkf/emacs-ipython-notebook
• 170308 recover old python-outline! It does exactly what I want.. I can't use py-hide etc.
• 170228 Now this repo is after a huge clean up. Remove plugins/ (now I'm using the Emacs packaging system).
• 07XXXX I started using Emacs, in the 3rd year of my studies, "forced" by Dr. Murzyn (thank you!)(http://bioinfo.mol.uj.edu.pl/modmol/People/KrzysztofMurzyn)

C-c o r # random()
C-c o R # randomf() # with emacs-orgmode-issue::XXXXXXXXXX
toggle-truncate-lines 
C-c o s insert-safari
M-q  toggle-truncate-lines
meta is cmd on mac
M-, # lsp jump back
    C-c o i org-capture

Installed manually into plugins. https://github.com/zerolfx/copilot.el

(defun random ()
  (interactive)
  (insert (shell-command-to-string "/Users/magnus/bin/random")))

(global-set-key (kbd "C-c o r") 'random)

(defun randomf ()
  (interactive)
  (insert (shell-command-to-string "/Users/magnus/bin/randomf")))

(global-set-key (kbd "C-c o R") 'randomf)