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Generalized Kraskov Estimator for Normalized Mutual Information

Analysis framework of dissipation-corrected targeted molecular dynamics (dcTMD) simulations.

Selecting Features for Markov Modeling: A Case Study on HP35

DESRES trajectory of wild type HP-35 at 360K

Finding pathways from an Markov State Model

Correlation-based feature selection of Molecular Dynamics simulations

Helper function for Markov State Models

Unbearably fast near-real-time pure-Python runtime-static type-checker.

The DPA package is the scikit-learn compatible implementation of the Density Peaks Advanced clustering algorithm. The algorithm provides robust and visual information about the clusters, their stat…

Range-based for loops to iterate over a range of numbers or values

🐍 ➡️ 📜 Auto-generate API documentation for Python projects

Fastest Gephi's ForceAtlas2 graph layout algorithm implemented for Python and NetworkX

Analysis of EBOV genome sequence from Guinea, Sierra Leone and Liberia from 2014-2016

C++ port of tqdm

LOOS: a lightweight object-oriented structure analysis library

Customize doxygen output to use the twitter bootstrap framework.