Starred repositories
Hosted version of cellxgene
An ACP (Agent Client Protocol) implementation in Emacs lisp as per https://agentclientprotocol.com
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Autonomous coding agent right in your IDE, capable of creating/editing files, executing commands, using the browser, and more with your permission every step of the way.
interactive & hardware agnostic SDK for lab automation
MCP server for org-mode and org-roam knowledge base management
Meta Flow Matching: Integrating Vector Fields on the Wasserstein Manifold
ClipCascade is a lightweight utility that automatically syncs the clipboard across devices, no key press required.
A large scale benchmark for cross-modal learning of histology and spatial expressions
Biomni: a general-purpose biomedical AI agent
A curated list of resources for using LLMs to develop more competitive grant applications.
AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt pretrained models and generate finetuned models for downstr…
Workflow to Fetch Public Sequencing Data and Metadata Using iSeq and MrBiomics Module.
Send zotero libraby to semantic scholar and add alert on them
Emacs utilities for code split into cells, including Jupyter notebooks
Geometric Generative Model Tutorial at LoG 2024
Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.
MrBiomics: Composable modules and recipes automate bioinformatics for multi-omics analyses
Your AI second brain. Self-hostable. Get answers from the web or your docs. Build custom agents, schedule automations, do deep research. Turn any online or local LLM into your personal, autonomous …
CellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
A simple GUI for OneDrive Linux client with multi-account support.
Resources to install NixOS bare metal on Apple Silicon Macs [maintainers=@tpwrules,@flokli,@yuyuyureka]