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🦖Pytorch implementation of popular Attention Mechanisms, Vision Transformers, MLP-Like models and CNNs.🔥🔥🔥

Python 517 48 Updated Jan 11, 2024

A Python package for performing Widom insertion simulations to calculate gas adsorption properties in porous materials

Python 12 2 Updated Sep 22, 2025

Official Repository for the Uni-Mol Series Methods

Python 967 151 Updated May 29, 2025

🌟 [NeurIPS '25 Spotlight] Official implement of QHFlow for DFT Hamiltonian prediction

Python 19 2 Updated Oct 25, 2025

A trainable PyTorch reproduction of AlphaFold 3.

Python 1,365 178 Updated Nov 5, 2025

PyTorch Lightning + Hydra. A very user-friendly template for rapid and reproducible ML experimentation with best practices. ⚡🔥⚡

Python 6 Updated Jun 3, 2025

Educational implementation of the Discrete Flow Matching paper

Jupyter Notebook 122 7 Updated Aug 26, 2024

Tiny AutoEncoder for Stable Diffusion

Python 806 40 Updated Apr 19, 2025

Implementation of Autoregressive Diffusion in Pytorch

Python 414 11 Updated Nov 3, 2024

Tutorials for using the pymatgen library

Jupyter Notebook 61 12 Updated May 27, 2025

A concise but complete full-attention transformer with a set of promising experimental features from various papers

Python 5,664 485 Updated Nov 4, 2025

Visualizer for neural network, deep learning and machine learning models

JavaScript 31,716 3,019 Updated Nov 5, 2025

Computations and statistics on manifolds with geometric structures.

Python 1,419 275 Updated Nov 2, 2025

A PyTorch library for all things Reinforcement Learning (RL) for Combinatorial Optimization (CO)

Python 714 126 Updated Jul 1, 2025
Python 40 6 Updated Oct 8, 2024

Geometric Generative Model Tutorial at LoG 2024

Jupyter Notebook 27 6 Updated Nov 27, 2024

The AI Scientist: Towards Fully Automated Open-Ended Scientific Discovery 🧑‍🔬

Jupyter Notebook 11,656 1,710 Updated Apr 26, 2025

A summary of related works about flow matching, stochastic interpolants

590 17 Updated Mar 25, 2025

code for "Riemannian Flow Matching on General Geometries".

Python 268 25 Updated Mar 13, 2024

TorchCFM: a Conditional Flow Matching library

Python 2,078 166 Updated Sep 9, 2025

3D transformations for Python.

Python 689 72 Updated Oct 16, 2025

FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation

Jupyter Notebook 262 24 Updated Dec 10, 2024

The Art of Debugging

Python 963 44 Updated Oct 31, 2025

Machine Learning Engineering Open Book

Python 15,602 956 Updated Oct 27, 2025

Artificial Intelligence Research for Science (AIRS)

Jupyter Notebook 701 81 Updated Nov 4, 2025

Fitness landscape exploration sandbox for biological sequence design.

Jupyter Notebook 168 22 Updated Feb 16, 2023

Official repository for "DiffAssemble: A Unified Graph-Diffusion Model for 2D and 3D Reassembly" accepted at CVPR2024

Python 88 10 Updated Mar 5, 2024

Repository of notes, code and notebooks in Python for the book Pattern Recognition and Machine Learning by Christopher Bishop

Jupyter Notebook 2,479 532 Updated Jul 25, 2022

sGDML - Reference implementation of the Symmetric Gradient Domain Machine Learning model

Python 159 40 Updated Jun 13, 2025

Generate an Amber prmtop file from a pdb file.

Python 6 4 Updated Dec 12, 2022
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