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Commit and be happy
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Commit and be happy
46 followers · 7 following

Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: YOLOAchievement: StarstruckAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex2Achievement: Pull Sharkx3Achievement: YOLOAchievement: StarstruckAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Organizations

@sccn @bids-standard @hed-standard @UCF-BRaIN-Lab @MERIIT @nemarDatasets @unisep-framework @EEGManySteps @eeg2025 @OpenScience-Collective @signalJourney @Annotation-Garden

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neuromechanist/README.md

Hi, I'm Yahya

Assistant Project Scientist & Principal Investigator at the Swartz Center for Computational Neuroscience, UC San Diego

I develop open-source tools for biosignal analysis and contribute to neuroinformatics standards. My research integrates computational neuroscience with human cognition and behavior, focusing on EEG/EMG signal processing, neuroinformatics infrastructure, and the neural control of movement.

Affiliations


SCCN
Project Scientist
BIDS
Maintainer
HED
Working Group
NEMAR
Admin
Annotation Garden
Founder
OSC
Founder

Featured Work

HBN-EEG FAIR implementation of the Healthy Brain Network EEG dataset; 3,600+ participants, BIDS-formatted with HED annotations
NEMAR Citations Dashboard Interactive analysis of dataset citations and research impact within the NEMAR ecosystem
Annotation Garden Open infrastructure for collaborative annotation of neuroscience stimuli
signalJourney Specification and toolkit for standardizing electrophysiology processing pipelines

Open-Source Tools

Standards & Infrastructure

Signal Processing

  • emg2mu - PyTorch-accelerated EMG decomposition
  • emgio - Unified interface for EMG data formats
  • hdEMG-Decomposition - ICA decomposition for high-density sEMG

AI/LLM Integration

  • MATLAB-MCP - Model Context Protocol for MATLAB
  • HED-MCP - MCP implementation for HED annotations

Research Initiatives

  • EEGManySteps - Community-driven standardization for Mobile Brain/Body Imaging
  • unisep - Unified Sensor Placement framework for annotating wearables placement

Connect

Website Google Scholar LinkedIn Mastodon

github-snake

Popular repositories Loading

  1. hdEMG-Decomposition hdEMG-Decomposition Public

    MATLAB implementation of (FAST) ICA decomposition of hd-sEMG signals to motor units

    MATLAB 44 8

  2. emg2mu emg2mu Public

    PyTorch-Accelerated High-Density EMG Decomposition to Motor Units in Python

    Jupyter Notebook 11 3

  3. matlab-mcp-tools matlab-mcp-tools Public

    Python 11 2

  4. emgio emgio Public

    A unified interface to convert EMG data from various systems to EDF/BDF

    Python 4 2

  5. fastICA_EMG_decomp fastICA_EMG_decomp Public

    Matlab implementation of FastICA approach for hdEMG decompostion, presented in the Hyser dataset paper

    MATLAB 3 2

  6. eLocs eLocs Public

    Functions to digitize EEG electrode locations (eLocs) using 3D scanners and motion capture

    MATLAB 2 5