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Commits on Feb 2, 2026

• Merge pull request #970 from nf-core/dev

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  jfy133

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  b52fa53

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• Merge pull request #972 from nf-core/add-pr-labeller-workflow

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  jfy133

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• [automated] Fix code linting

  nf-core-bot

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  ca45d13

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• Add PR labeller workflow

  jfy133

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• Add longer singularity pullTimeout for DasTool

  jfy133

  committed
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Commits on Jan 29, 2026

• Merge branch 'dev' of github.com:nf-core/mag into dev

  jfy133

  committed
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• Remove no-longer needed versions mixing for metabat2

  jfy133

  committed
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• Update release date for v5.4.0 in CHANGELOG

  jfy133

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• Update METABAT2 module prevent input assemblies being modified and emitted with bins

  jfy133

  committed
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• Fix file extension based on review from @charles-plessyand @takiifujita-ui

  jfy133

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Commits on Jan 26, 2026

• Merge pull request #969 from nf-core/bump-version-release-5.4

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  jfy133

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• Update CHANGELOG.md

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  jfy133

  and

  d4straub

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• Bump versios in tests

  jfy133

  committed
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• Version bump for release

  jfy133

  committed
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Commits on Jan 25, 2026

• Merge pull request #967 from nf-core/update-utils-subworkflow

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  jfy133

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• Update tuils_nfcore_pipeline

  jfy133

  committed
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Commits on Jan 22, 2026

• Merge pull request #931 from PetcuBogdan/ale_module

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  dialvarezs

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• Add ALE to pipeline summary

  dialvarezs

  committed
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• Address review comments

  dialvarezs

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• Remove log from output (not published)

  dialvarezs

  committed
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• Remove repeated comment

  dialvarezs

  committed
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• Remove ALE from MultiQC config (not supported)

  dialvarezs

  committed
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• Add ALE citation

  dialvarezs

  committed
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Commits on Jan 21, 2026

• Remove ALE publish unneeded pattern

  dialvarezs

  committed
  0d2e94e

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• Simplify condition to filter short read assemblies

  dialvarezs

  committed
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• Update ALE output docs

  dialvarezs

  committed
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• Update ALE usage docs

  dialvarezs

  committed
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• Merge remote-tracking branch 'upstream/dev' into ale_module

  dialvarezs

  committed
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• Merge pull request #962 from AlexHoratio/dev

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  jfy133

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• removed nf-test script that shouldnt be here

  

  Alex Caswell

  committed
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Commits on Jan 20, 2026

• snapshot update

  

  Alex Caswell

  committed
  21c0674

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• Merge branch 'dev' into dev

  jfy133

  authored
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• Merge pull request #966 from nf-core/workaround-checkm2-dl

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  jfy133

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• Update snapshot

  jfy133

  committed
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• Workaround Checkm2 database building until aria2 is unblocked (will run longer)

  jfy133

  committed
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