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Add phix removal bowtie2 version#305

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skrakau merged 2 commits into
nf-core:devfrom
skrakau:add_phixrm_bowtie2_version
May 28, 2022
Merged

Add phix removal bowtie2 version#305
skrakau merged 2 commits into
nf-core:devfrom
skrakau:add_phixrm_bowtie2_version

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@skrakau

@skrakau skrakau commented May 27, 2022

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Add Bowtie2 version for process BOWTIE2_PHIX_REMOVAL_ALIGN to software_versions.yml

PR checklist

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
    • If you've added a new tool - have you followed the pipeline conventions in the contribution docs
    • If necessary, also make a PR on the nf-core/mag branch on the nf-core/test-datasets repository.
  • Make sure your code lints (nf-core lint).
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Usage Documentation in docs/usage.md is updated.
  • Output Documentation in docs/output.md is updated.
  • CHANGELOG.md is updated.
  • README.md is updated (including new tool citations and authors/contributors).

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github-actions Bot commented May 27, 2022 •
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nf-core lint overall result: Passed ✅ ⚠️

Posted for pipeline commit 40fa130

+| ✅ 147 tests passed       |+
#| ❔   1 tests were ignored |#
!| ❗   1 tests had warnings |!
Details

❗ Test warnings:

  • readme - README did not have a Nextflow minimum version badge.

❔ Tests ignored:

  • files_unchanged - File ignored due to lint config: lib/NfcoreTemplate.groovy

✅ Tests passed:

Run details

  • nf-core/tools version 2.4.1
  • Run at 2022-05-28 19:53:06

d4straub
d4straub approved these changes May 27, 2022
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@d4straub d4straub left a comment

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LGTM, do you want to update the CHANGELOG as well?

@skrakau skrakau merged commit 22aee76 into nf-core:dev May 28, 2022
@skrakau skrakau deleted the add_phixrm_bowtie2_version branch July 22, 2022 09:23
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@d4straub d4straub d4straub approved these changes

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@skrakau @d4straub