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Remove samtools/depth in subsample

enhancementNew feature or requestNew feature or request

Status: Open.

#289 In nf-core/phaseimpute;

· LouisLeNezet opened on May 7, 2026

Add post-imputation filter step

enhancementNew feature or requestNew feature or request

Status: Open.

#287 In nf-core/phaseimpute;

· LouisLeNezet opened on Apr 30, 2026

Check channel join

bugSomething isn't workingSomething isn't working

Status: Open.

#241 In nf-core/phaseimpute;

· LouisLeNezet opened on Dec 16, 2025

Use sites VCF to select variants to impute and clarify posfile.csv

enhancementNew feature or requestNew feature or request

Status: Open.

#212 In nf-core/phaseimpute;

· LouisLeNezet opened on Nov 13, 2025

Add phase_rare to phasing subworkflow

enhancementNew feature or requestNew feature or request

Status: Open.

#207 In nf-core/phaseimpute;

· LouisLeNezet opened on Sep 24, 2025

Use of multiple panel at once

bugSomething isn't workingSomething isn't working

Status: Open.

#191 In nf-core/phaseimpute;

· LouisLeNezet opened on Apr 29, 2025

Add QUILT2

enhancementNew feature or requestNew feature or request

Status: Open.

#116 In nf-core/phaseimpute;

· atrigila opened on Aug 6, 2024

·  

1.2.0

Panel chunking

enhancementNew feature or requestNew feature or request

Status: Open.

#95 In nf-core/phaseimpute;

· LouisLeNezet opened on Jul 3, 2024

·  

1.2.0

Imputation of chrX

enhancementNew feature or requestNew feature or request

Status: Open.

#31 In nf-core/phaseimpute;

· atrigila opened on Apr 22, 2024

·  

1.2.0