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fix nf-core bot snapshot action #4083

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Merged
mashehu merged 3 commits into from
Mar 5, 2026
Merged

fix nf-core bot snapshot action #4083

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df51d00
fix nf-core bot snapshot action
mashehu Mar 5, 2026
644fbe8
[automated] Update CHANGELOG.md
nf-core-bot Mar 5, 2026
240e0ce
Merge branch 'dev' into fix-snapshots-action
mirpedrol Mar 5, 2026
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4 changes: 2 additions & 2 deletions .github/workflows/update-template-snapshots.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -82,7 +82,7 @@ jobs:
# Create template files
- name: Create template skip ${{ matrix.TEMPLATE }}
run: |
mkdir create-test-lint-wf
mkdir -p create-test-lint-wf
export NXF_WORK=$(pwd)
if [ ${{ matrix.TEMPLATE }} == "all" ]
then
Expand Down Expand Up @@ -117,7 +117,7 @@ jobs:
cd create-test-lint-wf/my-prefix-testpipeline
nf-test test \
--profile=+docker \
--verbose
--verbose \
--update-snapshot

- name: Copy snapshot to .github/snapshots
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1 change: 1 addition & 0 deletions CHANGELOG.md
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Expand Up @@ -16,6 +16,7 @@
- bump nf-test to 0.9.4 ([#4079](https://github.com/nf-core/tools/pull/4079))
- nf-core bot: collect all snapshots before commiting ([#4082](https://github.com/nf-core/tools/pull/4082))
- Update GitHub Actions to v4 (major) ([#4081](https://github.com/nf-core/tools/pull/4081))
- fix nf-core bot snapshot action ([#4083](https://github.com/nf-core/tools/pull/4083))

### Linting

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