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Template: Add tests to ensure all files are part of a template customisation group and all groups are tested#3099

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ewels merged 14 commits into
nf-core:devfrom
mirpedrol:test-template-customisation
Sep 1, 2024
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Template: Add tests to ensure all files are part of a template customisation group and all groups are tested#3099
ewels merged 14 commits into
nf-core:devfrom
mirpedrol:test-template-customisation

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@mirpedrol

@mirpedrol mirpedrol commented Aug 5, 2024

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Add testing for template customisation #2340
Note: Will fail until we add all files to a customisation group. All ready to add this test :)

@mirpedrol mirpedrol force-pushed the test-template-customisation branch from 40f01d1 to ea52f9b Compare August 28, 2024 08:27
@mirpedrol mirpedrol force-pushed the test-template-customisation branch from a2112fe to 80b5b74 Compare August 29, 2024 11:33
@mirpedrol mirpedrol force-pushed the test-template-customisation branch from 80b5b74 to 283284c Compare August 29, 2024 11:37

@ewels ewels left a comment

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LGTM!

Comment thread nf_core/pipeline-template/README.md Outdated
// Boilerplate options
outdir = null
publish_dir_mode = 'copy'
{% if modules %}publish_dir_mode = 'copy'{% endif %}

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Might be nicer to split these across lines to keep formatting / readability - should be able to use the Jinja - syntax to remove that whitespace on template render.

Needn't be a blocker for merging this though.

@ewels ewels merged commit 25224a0 into nf-core:dev Sep 1, 2024
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2 participants