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ukb_wes_450k_gwas Public
Forked from lindgrengroup/ukb_wes_450k_gwasAssociation tests for UKB 450k WES data
Jupyter Notebook MIT License UpdatedDec 5, 2025 -
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ldscsim Public
Simulation framework for testing LD score regression
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oxford-statgen-summer-school Public
Forked from gavinband/oxford-statgen-summer-schoolCourse materials for the Oxford Statistical Genomics Summer School (https://www.conted.ox.ac.uk/courses/oxford-statistical-genomics-summer-school)
JavaScript MIT License UpdatedJun 17, 2022 -
QC_step_templates Public
Forked from astheeggeggs/BRaVa_curationR GNU General Public License v3.0 UpdatedMay 10, 2022 -
tskit Public
Forked from tskit-dev/tskitThe tree sequence toolkit
Python MIT License UpdatedApr 28, 2022 -
msprime Public
Forked from tskit-dev/msprimeSimulate genealogical trees and genomic sequence data using population genetic models
Python GNU General Public License v3.0 UpdatedNov 13, 2021 -
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OpenABM-Covid19 Public
Forked from BDI-pathogens/OpenABM-Covid19OpenABM-Covid19: an agent-based model for modelling the spread of SARS-CoV-2 (coronavirus) and control interventions for the Covid-19 epidemic
Python GNU General Public License v3.0 UpdatedJun 9, 2021 -
PRScs Public
Forked from getian107/PRScsPolygenic prediction via continuous shrinkage priors
Python MIT License UpdatedJun 5, 2021 -
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sex_linreg Public
Nested linear regression models to determine phenotypic association of sex
Python MIT License UpdatedFeb 12, 2021 -
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risk_gradients Public
Risk gradients for genome-wide polygenic scores
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sexdiff Public
Scripts for calculating significantly different loci between sexes.
Python UpdatedSep 28, 2020 -
tsconvert Public
Forked from tskit-dev/tsconvertUtilities for converting tree sequences to and from other formats
Python MIT License UpdatedSep 28, 2020 -
split Public
chunking/meta-analysis GWAS + GWAS on split datasets
Jupyter Notebook MIT License UpdatedSep 24, 2020 -
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sim_sumstats Public
Package for simulating GWAS summary statistics
Python MIT License UpdatedSep 5, 2020 -
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hail Public
Forked from hail-is/hailScalable genomic data analysis.
Scala MIT License UpdatedMar 26, 2020 -
picopili Public
Forked from Nealelab/picopiliFork of ricopili for development of pipeline for family-based data
Python UpdatedFeb 6, 2020 -
ldsc Public
Forked from bulik/ldscLD Score Regression (LDSC) in Python 3
Python GNU General Public License v3.0 UpdatedJan 18, 2020 -
pathos Public
Forked from uqfoundation/pathosparallel graph management and execution in heterogeneous computing
Python Other UpdatedDec 30, 2019 -
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