My personal website using Dean Attali's Beautiful Jekyll can be found here

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

Detect doublets in single-cell RNA-seq data

A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

A Jekyll plugin to add metadata tags for search engines and social networks to better index and display your site's content.

My personal blog about PowerShell and automation in general.

Open source on demand courses and cheat sheets for Git and GitHub

Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially expressed genes. PowsimR is a flexible tool to simulate and ev…

IA-SVA data examples

Simple App to visualize single cell datasets

Aggregate results from bioinformatics analyses across many samples into a single report.

The HTML Presentation Framework

Code examples for “Interactive Data Visualization for the Web”

Interactive Web Plotting for Python

📝 An awesome Data Science repository to learn and apply for real world problems.

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file form…

Useful bash one-liners for bioinformatics.

Python codes in Machine Learning, NLP, Deep Learning and Reinforcement Learning

Batch effects and the effective design of single-cell gene expression studies